Publikationer

A full-length infectious cDNA clone of a dsRNA totivirus-like virus

Wang, Han; Maia, Filipe R.N.C.; Okamoto, Kenta

Ingår i Virology, s. 127-133, 2022.

DOI för A full-length infectious cDNA clone of a dsRNA totivirus-like virus Ladda ner fulltext (pdf) av A full-length infectious cDNA clone of a dsRNA totivirus-like virus

Unsupervised learning approaches to characterizing heterogeneous samples using X-ray single-particle imaging

Zhuang, Yulong; Awel, Salah; Barty, Anton; Bean, Richard et al.

Ingår i IUCrJ, s. 204-214, 2022.

DOI för Unsupervised learning approaches to characterizing heterogeneous samples using X-ray single-particle imaging Ladda ner fulltext (pdf) av Unsupervised learning approaches to characterizing heterogeneous samples using X-ray single-particle imaging

Noise reduction and mask removal neural network for X-ray single-particle imaging

Bellisario, Alfredo; Maia, Filipe; Ekeberg, Tomas

Ingår i Journal of applied crystallography, s. 122-132, 2022.

DOI för Noise reduction and mask removal neural network for X-ray single-particle imaging Ladda ner fulltext (pdf) av Noise reduction and mask removal neural network for X-ray single-particle imaging

3D diffractive imaging of nanoparticle ensembles using an x-ray laser

Ayyer, Kartik; Xavier, P. Lourdu; Bielecki, Johan; Shen, Zhou et al.

Ingår i Optica, s. 15-23, 2021.

DOI för 3D diffractive imaging of nanoparticle ensembles using an x-ray laser Ladda ner fulltext (pdf) av 3D diffractive imaging of nanoparticle ensembles using an x-ray laser

Introduction to the special issue on Ptychography: software and technical developments

Marchesini, Stefano; Shapiro, David; Maia, Filipe

Ingår i Journal of applied crystallography, s. 384-385, 2021.

DOI för Introduction to the special issue on Ptychography: software and technical developments

Ptychographic wavefront characterization for single-particle imaging at x-ray lasers

Daurer, Benedikt J.; Sala, Simone; Hantke, Max; Reddy, Hemanth K.N. et al.

Ingår i Optica, s. 551-562, 2021.

DOI för Ptychographic wavefront characterization for single-particle imaging at x-ray lasers Ladda ner fulltext (pdf) av Ptychographic wavefront characterization for single-particle imaging at x-ray lasers

Three-Dimensional Coherent Bragg Imaging of Rotating Nanoparticles

Björling, Alexander; Marcal, Lucas A. B.; Solla-Gullon, Jose; Wallentin, Jesper et al.

Ingår i Physical Review Letters, 2020.

DOI för Three-Dimensional Coherent Bragg Imaging of Rotating Nanoparticles Ladda ner fulltext (pdf) av Three-Dimensional Coherent Bragg Imaging of Rotating Nanoparticles

Diffraction data from aerosolized Coliphage PR772 virus particles imaged with the Linac Coherent Light Source

Li, Haoyuan; Nazari, Reza; Abbey, Brian; Alvarez, Roberto et al.

Ingår i Scientific Data, 2020.

DOI för Diffraction data from aerosolized Coliphage PR772 virus particles imaged with the Linac Coherent Light Source Ladda ner fulltext (pdf) av Diffraction data from aerosolized Coliphage PR772 virus particles imaged with the Linac Coherent Light Source

Acquired Functional Capsid Structures in Metazoan Totivirus-like dsRNA Virus

Okamoto, Kenta; Ferreira, Ricardo J.; Larsson, Daniel S D; Maia, Filipe R.N.C. et al.

Ingår i Structure, s. 888-+, 2020.

DOI för Acquired Functional Capsid Structures in Metazoan Totivirus-like dsRNA Virus

Pulse-to-pulse wavefront sensing at free-electron lasers using ptychography

Sala, Simone; Daurer, Benedikt J.; Odstrcil, Michal; Capotondi, Flavio et al.

Ingår i Journal of applied crystallography, s. 949-956, 2020.

DOI för Pulse-to-pulse wavefront sensing at free-electron lasers using ptychography Ladda ner fulltext (pdf) av Pulse-to-pulse wavefront sensing at free-electron lasers using ptychography

Perspectives on single particle imaging with x rays at the advent of high repetition rate x-ray free electron laser sources

Bielecki, Johan; Maia, Filipe R. N. C.; Mancuso, Adrian P.

Ingår i Structural Dynamics, 2020.

DOI för Perspectives on single particle imaging with x rays at the advent of high repetition rate x-ray free electron laser sources Ladda ner fulltext (pdf) av Perspectives on single particle imaging with x rays at the advent of high repetition rate x-ray free electron laser sources

Megahertz single-particle imaging at the European XFEL

Sobolev, Egor; Zolotarev, Serguey; Giewekemeyer, Klaus; Bielecki, Johan et al.

Ingår i Communications Physics, 2020.

DOI för Megahertz single-particle imaging at the European XFEL Ladda ner fulltext (pdf) av Megahertz single-particle imaging at the European XFEL

The role of transient resonances for ultra-fast imaging of single sucrose nanoclusters

Ho, Phay J.; Daurer, Benedikt J.; Hantke, Max; Bielecki, Johan et al.

Ingår i Nature Communications, 2020.

DOI för The role of transient resonances for ultra-fast imaging of single sucrose nanoclusters Ladda ner fulltext (pdf) av The role of transient resonances for ultra-fast imaging of single sucrose nanoclusters

Evaluation of serial crystallographic structure determination within megahertz pulse trains

Yefanov, Oleksandr; Oberthuer, Dominik; Bean, Richard; Wiedorn, Max O. et al.

Ingår i Structural Dynamics, 2019.

DOI för Evaluation of serial crystallographic structure determination within megahertz pulse trains Ladda ner fulltext (pdf) av Evaluation of serial crystallographic structure determination within megahertz pulse trains

Electrospray sample injection for single-particle imaging with x-ray lasers

Bielecki, Johan; Hantke, Max F.; Daurer, Benedikt J.; Reddy, Hemanth K. N. et al.

Ingår i Science Advances, 2019.

DOI för Electrospray sample injection for single-particle imaging with x-ray lasers

Cryo-EM structure of a Marseilleviridae virus particle reveals a large internal microassembly

Okamoto, Kenta; Miyazaki, Naoyuki; Reddy, Hemanth K.N.; Hantke, Max F et al.

Ingår i Virology, s. 239-245, 2018.

DOI för Cryo-EM structure of a Marseilleviridae virus particle reveals a large internal microassembly

Rayleigh-scattering microscopy for tracking and sizing nanoparticles in focused aerosol beams

Hantke, Max Felix; Bielecki, Johan; Kulyk, Olena; Westphal, Daniel et al.

Ingår i IUCrJ, s. 673-680, 2018.

DOI för Rayleigh-scattering microscopy for tracking and sizing nanoparticles in focused aerosol beams Ladda ner fulltext (pdf) av Rayleigh-scattering microscopy for tracking and sizing nanoparticles in focused aerosol beams

Single-particle imaging without symmetry constraints at an X-ray free-electron laser

Rose, Max; Bobkov, Sergey; Ayyer, Kartik; Kurta, Ruslan P. et al.

Ingår i IUCrJ, s. 727-736, 2018.

DOI för Single-particle imaging without symmetry constraints at an X-ray free-electron laser Ladda ner fulltext (pdf) av Single-particle imaging without symmetry constraints at an X-ray free-electron laser

A statistical approach to detect protein complexes at X-ray free electron laser facilities

Pietrini, Alberto; Bielecki, Johan; Timneanu, Nicusor; Hantke, Max F. et al.

Ingår i Communications Physics, s. 92:1-11, 2018.

DOI för A statistical approach to detect protein complexes at X-ray free electron laser facilities

Megahertz serial crystallography

Wiedorn, Max O.; Oberthuer, Dominik; Bean, Richard; Schubert, Robin et al.

Ingår i Nature Communications, 2018.

DOI för Megahertz serial crystallography Ladda ner fulltext (pdf) av Megahertz serial crystallography

Considerations for three-dimensional image reconstruction from experimental data in coherent diffractive imaging

Lundholm, Ida V.; Sellberg, Jonas A.; Ekeberg, Tomas; Hantke, Max F. et al.

Ingår i IUCrJ, s. 531-541, 2018.

DOI för Considerations for three-dimensional image reconstruction from experimental data in coherent diffractive imaging

Three-dimensional localization of nanoscale battery reactions using soft X-ray tomography

Yu, Young-Sang; Farmand, Maryam; Kim, Chunjoong; Liu, Yijin et al.

Ingår i Nature Communications, 2018.

DOI för Three-dimensional localization of nanoscale battery reactions using soft X-ray tomography Ladda ner fulltext (pdf) av Three-dimensional localization of nanoscale battery reactions using soft X-ray tomography

Ptychographic imaging for the characterization of X-ray free-electron laser beams

Sala, S.; Daurer, B. J.; Hantke, M. F.; Ekeberg, Tomas et al.

Ingår i X-RAY MICROSCOPY CONFERENCE 2016 (XRM 2016), 2017.

DOI för Ptychographic imaging for the characterization of X-ray free-electron laser beams Ladda ner fulltext (pdf) av Ptychographic imaging for the characterization of X-ray free-electron laser beams

Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles

Gorkhover, Tais; Ulmer, Anatoli; Ferguson, Ken; Bucher, Max et al.

Ingår i Nature Photonics, s. 150-153, 2018.

DOI för Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles

Coherent diffraction of single Rice Dwarf Virus particles using soft X-rays at the Linac Coherent Light Source

Munke, Anna; van der Schot, Gijs; Maia, Filipe; Ekeberg, Tomas et al.

Ingår i Nature Scientific Data, 2018.

Structural variability and complexity of the giant Pithovirus sibericum particle revealed by high-voltage electron cryo-tomography and energy-filtered electron cryo-microscopy

Okamoto, Kenta; Miyazaki, Naoyuki; Song, Chihong; Maia, Filipe et al.

Ingår i Scientific Reports, 2017.

DOI för Structural variability and complexity of the giant Pithovirus sibericum particle revealed by high-voltage electron cryo-tomography and energy-filtered electron cryo-microscopy Ladda ner fulltext (pdf) av Structural variability and complexity of the giant Pithovirus sibericum particle revealed by high-voltage electron cryo-tomography and energy-filtered electron cryo-microscopy

Experimental strategies for imaging bioparticles with femtosecond hard X-ray pulses

Daurer, Benedikt J.; Okamoto, Kenta; Bielecki, Johan; Maia, Filipe R. N. C. et al.

Ingår i IUCrJ, s. 251-262, 2017.

DOI för Experimental strategies for imaging bioparticles with femtosecond hard X-ray pulses

Wavefront sensing of individual XFEL pulses using ptychography

Daurer, Benedikt J; Simone, Sala; Hantke, Max; Reddy, Hemanth et al.

Correlations in scattered X-ray laser pulses reveal nanoscale structural features of viruses

Kurta, Ruslan P.; Donatelli, Jeffrey J.; Yoon, Chun Hong; Berntsen, Peter et al.

Ingår i Physical Review Letters, s. 158102:1-7, 2017.

DOI för Correlations in scattered X-ray laser pulses reveal nanoscale structural features of viruses

Coherent soft X-ray diffraction imaging of Coliphage PR772 at the Linac coherent light source

Reddy, Hemanth K. N.; Yoon, Chun Hong; Aquila, Andrew; Awel, Salah et al.

Ingår i Scientific Data, 2017.

DOI för Coherent soft X-ray diffraction imaging of Coliphage PR772 at the Linac coherent light source

Near-edge X-ray refraction fine structure microscopy

Farmand, Maryam; Celestre, Richard; Denes, Peter; Kilcoyne, A. L. David et al.

Ingår i Applied Physics Letters, 2017.

DOI för Near-edge X-ray refraction fine structure microscopy

Nanosurveyor: a framework for real-time data processing

Daurer, Benedikt J.; Krishnan, Hari; Perciano, Talita; Rocha Neves Couto Maia, Filipe et al.

Ingår i Advanced Structural and Chemical Imaging, 2017.

DOI för Nanosurveyor: a framework for real-time data processing Ladda ner fulltext (pdf) av Nanosurveyor: a framework for real-time data processing

Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser

Ekeberg, Tomas; Svenda, Martin; Seibert, M. Marvin; Abergel, Chantal et al.

Ingår i Scientific Data, 2016.

DOI för Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser Ladda ner fulltext (pdf) av Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser

The trickle before the torrent-diffraction data from X-ray lasers

Maia, Filipe R. N. C.; Hajdu, Janos

Ingår i Scientific Data, 2016.

DOI för The trickle before the torrent-diffraction data from X-ray lasers Ladda ner fulltext (pdf) av The trickle before the torrent-diffraction data from X-ray lasers

Real-Time Data-Intensive Computing

Parkinson, Dilworth Y.; Beattie, Keith; Chen, Xian; Correa, Joaquin et al.

Ingår i Proceedings Of The 12Th International Conference On Synchrotron Radiation Instrumentation (SRI2015), 2016.

DOI för Real-Time Data-Intensive Computing

CCP-FEL: a collection of computer programs for free-electron laser research

Maia, Filipe R. N. C.; White, Thomas A.; Loh, N. Duane; Hajdu, Janos

Ingår i Journal of applied crystallography, s. 1117-1120, 2016.

DOI för CCP-FEL: a collection of computer programs for free-electron laser research

The infectious particle of insect-borne totivirus-like Omono River virus has raised ridges and lacks fibre complexes

Okamoto, Kenta; Miyazaki, Naoyuki; Larsson, Daniel S. D.; Kobayashi, Daisuke et al.

Ingår i Scientific Reports, 2016.

DOI för The infectious particle of insect-borne totivirus-like Omono River virus has raised ridges and lacks fibre complexes Ladda ner fulltext (pdf) av The infectious particle of insect-borne totivirus-like Omono River virus has raised ridges and lacks fibre complexes

A data set from flash X-ray imaging of carboxysomes

Hantke, Max F.; Hasse, Dirk; Ekeberg, Tomas; John, Katja et al.

Ingår i Scientific Data, 2016.

DOI för A data set from flash X-ray imaging of carboxysomes Ladda ner fulltext (pdf) av A data set from flash X-ray imaging of carboxysomes

Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source

Munke, Anna; Andreasson, Jakob; Aquila, Andrew; Awel, Salah et al.

Ingår i Scientific Data, s. 160064:1-12, 2016.

DOI för Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source

Condor: a simulation tool for flash X-ray imaging

Hantke, Max F.; Ekeberg, Tomas; Maia, Filipe R. N. C.

Ingår i Journal of applied crystallography, s. 1356-1362, 2016.

DOI för Condor: a simulation tool for flash X-ray imaging Ladda ner fulltext (pdf) av Condor: a simulation tool for flash X-ray imaging

Open data set of live cyanobacterial cells imaged using an X-ray laser

van der Schot, Gijs; Svenda, Martin; Maia, Filipe R.N.C.; Hantke, Max F. et al.

Ingår i Scientific Data, 2016.

DOI för Open data set of live cyanobacterial cells imaged using an X-ray laser Ladda ner fulltext (pdf) av Open data set of live cyanobacterial cells imaged using an X-ray laser

SHARP: a distributed GPU-based ptychographic solver

Marchesini, Stefano; Krishnan, Hari; Daurer, Benedikt J.; Shapiro, David A. et al.

Ingår i Journal of applied crystallography, s. 1245-1252, 2016.

DOI för SHARP: a distributed GPU-based ptychographic solver

Unsupervised classification of single-particle X-ray diffraction snapshots by spectral clustering.

Yoon, Chun Hong; Schwander, Peter; Abergel, Chantal; Andersson, Inger et al.

Ingår i Optics Express, s. 15929-15936, 2011.

Hummingbird: monitoring and analyzing flash X-ray imaging experiments in real time

Daurer, Benedikt J.; Hantke, Max F.; Nettelblad, Carl; Maia, Filipe R. N. C.

Ingår i Journal of applied crystallography, s. 1042-1047, 2016.

DOI för Hummingbird: monitoring and analyzing flash X-ray imaging experiments in real time

Data publication with the structural biology data grid supports live analysis

Meyer, Peter A.; Socias, Stephanie; Key, Jason; Ransey, Elizabeth et al.

Ingår i Nature Communications, 2016.

DOI för Data publication with the structural biology data grid supports live analysis Ladda ner fulltext (pdf) av Data publication with the structural biology data grid supports live analysis

The linac coherent light source single particle imaging road map

Aquila, A.; Barty, A.; Bostedt, C.; Boutet, S. et al.

Ingår i Structural Dynamics, 2015.

DOI för The linac coherent light source single particle imaging road map

Three-dimensional reconstruction of the giant mimivirus particle with an X-ray free-electron laser

Ekeberg, Tomas; Svenda, Martin; Abergel, Chantal; Maia, Filipe R. N. C. et al.

Ingår i Physical Review Letters, s. 098102:1-6, 2015.

DOI för Three-dimensional reconstruction of the giant mimivirus particle with an X-ray free-electron laser Ladda ner fulltext (pdf) av Three-dimensional reconstruction of the giant mimivirus particle with an X-ray free-electron laser

Imaging single cells in a beam of live cyanobacteria with an X-ray laser

van der Schot, Gijs; Svenda, Martin; Maia, Filipe R. N. C.; Hantke, Max et al.

Ingår i Nature Communications, 2015.

DOI för Imaging single cells in a beam of live cyanobacteria with an X-ray laser

Explosion dynamics of sucrose nanospheres monitored by time of flight spectrometry and coherent diffractive imaging at the split-and-delay beam line of the FLASH soft X-ray laser

Rath, Asawari D.; Timneanu, Nicusor; Maia, Filipe R. N. C.; Bielecki, Johan et al.

Ingår i Optics Express, s. 28914-28925, 2014.

DOI för Explosion dynamics of sucrose nanospheres monitored by time of flight spectrometry and coherent diffractive imaging at the split-and-delay beam line of the FLASH soft X-ray laser

High-throughput imaging of heterogeneous cell organelles with an X-ray laser

Hantke, Max F.; Hasse, Dirk; Maia, Filipe R. N. C.; Ekeberg, Tomas et al.

Ingår i Nature Photonics, s. 943-949, 2014.

DOI för High-throughput imaging of heterogeneous cell organelles with an X-ray laser