Publications

Amselem E, Broadwater B, Hävermark T, Johansson M, Elf J (2023) Real-time single-molecule 3D tracking in E. coli based on cross-entropy minimization. Nat Commun (link)

Volkov IL, Lundin E, Kipper K, Metelev M, Zikrin S, Johansson M (2022) Spatiotemporal kinetics of the SRP pathway in live E. coli cells. Proc Natl Acad Sci U S A (link)

Metelev M, Lundin E, Volkov IL, Gynnå AH, Elf J, Johansson M (2022) Direct measurements of mRNA translation kinetics in living cells. Nat Commun (link)

Seefeldt AC, Aguirre Rivera J, Johansson M (2021) Direct measurements of erythromycin’s effect on protein synthesis kinetics in living bacterial cells. J Mol Biol, 443 (link)

Aguirre Rivera J, Larsson J, Volkov IL, Seefeldt AC, Sanyal S, Johansson M (2021) Real-time measurements of aminoglycoside effects on protein synthesis in live cells. Proc Natl Acad Sci U S A (link)

Marklund E, van Oosten B, Mao G, Amselem E, Kipper K, Sabantsev A, Emmerich A, Globisch D, Zheng X, Lehmann LC, Berg O, Johansson M, Elf J, Deindl S (2020) DNA surface exploration and operator bypassing during target search. Nature, 583: 858-861 (link)

Volkov IL, Seefeldt AC, Johansson M (2019) Tracking of single tRNAs for translation kinetics measurements in chloramphenicol treated bacteria. Methods, 162-163: 23-30 (link)

Volkov IL, Johansson M (2019) Single-molecule tracking approaches to protein synthesis kinetics in living cells. Biochemistry, 58: 7-14 (link)

Volkov IL, Lindén M, Aguirre Rivera J, Ieong KW, Metelev M, Elf J, Johansson M (2018) tRNA tracking for direct measurements of protein synthesis kinetics in live cells. Nat Chem Biol 14: 618-626 (link)

Nilsson OB, Hedman R, Marino J, Wickles S, Bischoff L, Johansson M, Müller-Lucks A, Trovato F, Puglisi JD, O'Brien EP, Beckmann R, von Heijne G (2015) Cotranslational protein folding inside the ribosome exit tunnel. Cell reports 12: 1533-1540 (link)

Zhang J, Ieong KW, Johansson M, Ehrenberg M (2015) Accuracy of initial codon selection by aminoacyl-tRNAs on the mRNA-programmed bacterial ribosome. Proc Natl Acad Sci U S A 112: 9602-9607 (link)

Johansson M, Chen J, Tsai A, Kornberg G, Puglisi JD (2014) Sequence-dependent elongation dynamics on macrolide-bound ribosomes. Cell reports 7: 1534-1546 (link)

Tsai A, Kornberg G, Johansson M, Chen J, Puglisi JD (2014) The Dynamics of SecM-Induced Translational Stalling. Cell reports 7: 1521-1533 (link)

Chen J, Petrov A, Johansson M, Tsai A, O'Leary SE, Puglisi JD (2014) Dynamic pathways of -1 translational frameshifting. Nature 512: 328-332 (link)

Tsai A, Uemura S, Johansson M, Puglisi EV, Marshall RA, Aitken CE, Korlach J, Ehrenberg M, Puglisi JD (2013) The impact of aminoglycosides on the dynamics of translation elongation. Cell reports 3: 497-508 (link)

Johansson M, Zhang J, Ehrenberg M (2012) Genetic code translation displays a linear trade-off between efficiency and accuracy of tRNA selection. Proc Natl Acad Sci U S A 109: 131-136 (link)

Johansson M., Ieong K. W., Åqvist, J., Pavlov M. Y., Ehrenberg M. (2011) Rate and accuracy of ribosomal peptidyl transfer in Ribosomes: Structure, Function and Dynamics eds. Rodnina M., Wintermeyer W., Green R. (Springer-Verlag, Wien)

Johansson M, Ieong KW, Trobro S, Strazewski P, Aqvist J, Pavlov MY, Ehrenberg M (2011) pH-sensitivity of the ribosomal peptidyl transfer reaction dependent on the identity of the A-site aminoacyl-tRNA. Proc Natl Acad Sci U S A 108: 79-84 (link)

Johansson M, Bouakaz E, Lovmar M, Ehrenberg M (2008) The kinetics of ribosomal peptidyl transfer revisited. Mol Cell 30: 589-598 (link)

Johansson M, Lovmar M, Ehrenberg M (2008) Rate and accuracy of bacterial protein synthesis revisited. Curr Opin Microbiol 11: 141-147 (link)