Department of Cell and Molecular Biology

Department of Cell ... Molecular Evolution Andersson, Siv Publications

Denna sida på svenska

Publications

Genome Evolution of a Symbiont Population for Pathogen Defense in Honeybees

Dyrhage, Karl; Garcia-Montaner, Andrea; Tamarit, Daniel; Seeger, Christian et al.

Part of Genome Biology and Evolution, 2022.

DOI for Genome Evolution of a Symbiont Population for Pathogen Defense in Honeybees Download full text (pdf) of Genome Evolution of a Symbiont Population for Pathogen Defense in Honeybees

Open access
Antibiotics should not be used for back/leg pain

Fritzell, Peter; Hägg, Olle; Bergström, Tomas; Jönsson, Bodil et al.

Part of Acta Orthopaedica, p. 244-246, 2021.

DOI for Antibiotics should not be used for back/leg pain Download full text (pdf) of Antibiotics should not be used for back/leg pain

Open access
Letter to the editor concerning "Comment to chronic low back pain, bacterial infection and treatment with antibiotics"

Fritzell, Peter; Bergström, Tomas; Andersson, Siv G. E.; Jönsson, Bodil et al.

Part of The spine journal, p. 1233-1235, 2021.

DOI for Letter to the editor concerning "Comment to chronic low back pain, bacterial infection and treatment with antibiotics"
The Subcellular Proteome of a Planctomycetes Bacterium Shows That Newly Evolved Proteins Have Distinct Fractionation Patterns

Seeger, Christian; Dyrhage, Karl; Mahajan, Mayank; Odelgard, Anna et al.

Part of Frontiers in Microbiology, 2021.

DOI for The Subcellular Proteome of a Planctomycetes Bacterium Shows That Newly Evolved Proteins Have Distinct Fractionation Patterns Download full text (pdf) of The Subcellular Proteome of a Planctomycetes Bacterium Shows That Newly Evolved Proteins Have Distinct Fractionation Patterns

Open access
Evolutionary Remodeling of the Cell Envelope in Bacteria of the Planctomycetes Phylum

Mahajan, Mayank; Seeger, Christian; Yee, Benjamin; Andersson, Siv G. E.

Part of Genome Biology and Evolution, p. 1528-1548, 2020.

DOI for Evolutionary Remodeling of the Cell Envelope in Bacteria of the Planctomycetes Phylum Download full text (pdf) of Evolutionary Remodeling of the Cell Envelope in Bacteria of the Planctomycetes Phylum

Open access
Paralogization and New Protein Architectures in Planctomycetes Bacteria with Complex Cell Structures

Mahajan, Mayank; Yee, Benjamin; Hägglund, Emil; Guy, Lionel et al.

Part of Molecular biology and evolution, p. 1020-1040, 2020.

DOI for Paralogization and New Protein Architectures in Planctomycetes Bacteria with Complex Cell Structures
Rethinking microbial symbioses

Tamarit, Daniel; Andersson, Siv G. E.

Part of FEMS Microbiology Letters, 2020.

DOI for Rethinking microbial symbioses Download full text (pdf) of Rethinking microbial symbioses

Open access
Bacteria: back pain, leg pain and Modic sign-a surgical multicentre comparative study

Fritzell, Peter; Welinder-Olsson, Christina; Jönsson, Bodil; Melhus, Åsa et al.

Part of European spine journal, p. 2981-2989, 2019.

DOI for Bacteria: back pain, leg pain and Modic sign-a surgical multicentre comparative study Download full text (pdf) of Bacteria: back pain, leg pain and Modic sign-a surgical multicentre comparative study

Open access
Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations

Garcia, Sarahi L; Stevens, Sarah L R; Crary, Benjamin; Martinez-Garcia, Manuel et al.

Part of The ISME Journal, p. 742-755, 2018.

DOI for Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations Download full text (pdf) of Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations

Open access
Genome Evolution of Bartonellaceae Symbionts of Ants at the Opposite Ends of the Trophic Scale

Bisch, Gaelle; Neuvonen, Minna M.; Pierce, Naomi E.; Russell, Jacob A. et al.

Part of Genome Biology and Evolution, p. 1687-1704, 2018.

DOI for Genome Evolution of Bartonellaceae Symbionts of Ants at the Opposite Ends of the Trophic Scale Download full text (pdf) of Genome Evolution of Bartonellaceae Symbionts of Ants at the Opposite Ends of the Trophic Scale

Open access
Origin and evolution of the Bartonella Gene Transfer Agent

Tamarit, Daniel; Neuvonen, Minna M.; Engel, Philipp; Guy, Lionel et al.

Part of Molecular biology and evolution, p. 451-464, 2018.

DOI for Origin and evolution of the Bartonella Gene Transfer Agent Download full text (pdf) of Origin and evolution of the Bartonella Gene Transfer Agent

Open access
Specificity in Arabidopsis thaliana recruitment of root fungal communities from soil and rhizosphere

Urbina, Hector; Breed, Martin F.; Zhao, Weizhou; Gurrala, Kanaka Lakshmi et al.

Part of Fungal Biology, p. 231-240, 2018.

DOI for Specificity in Arabidopsis thaliana recruitment of root fungal communities from soil and rhizosphere
Switches in Genomic GC Content Drive Shifts of Optimal Codons under Sustained Selection on Synonymous Sites

Sun, Yu; Tamarit, Daniel; Andersson, Siv

Part of Genome Biology and Evolution, p. 2560-2579, 2017.

DOI for Switches in Genomic GC Content Drive Shifts of Optimal Codons under Sustained Selection on Synonymous Sites Download full text (pdf) of Switches in Genomic GC Content Drive Shifts of Optimal Codons under Sustained Selection on Synonymous Sites

Open access
Tuwongella immobilis gen. nov., sp nov., a novel non-motile bacterium within the phylum Planctomycetes

Seeger, Christian; Butler, Margaret K.; Yee, Benjamin; Mahajan, Mayank et al.

Part of International Journal of Systematic and Evolutionary Microbiology, p. 4923-4929, 2017.

DOI for Tuwongella immobilis gen. nov., sp nov., a novel non-motile bacterium within the phylum Planctomycetes Download full text (pdf) of Tuwongella immobilis gen. nov., sp nov., a novel non-motile bacterium within the phylum Planctomycetes

Open access
Why mitochondria need a genome revisited

Björkholm, Patrik; Ernst, Andreas M.; Hagström, Erik; Andersson, Siv G. E.

Part of FEBS Letters, p. 65-75, 2017.

DOI for Why mitochondria need a genome revisited
Stress management strategies in single bacterial cells

Andersson, Siv G. E.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 3921-3923, 2016.

DOI for Stress management strategies in single bacterial cells
The genome of Rhizobiales bacteria in predatory ants reveals urease gene functions but no genes for nitrogen fixation

Neuvonen, Minna M.; Tamarit, Daniel; Näslund, Kristina; Liebig, Juergen et al.

Part of Scientific Reports, p. 1-11, 2016.

DOI for The genome of Rhizobiales bacteria in predatory ants reveals urease gene functions but no genes for nitrogen fixation Download full text (pdf) of The genome of Rhizobiales bacteria in predatory ants reveals urease gene functions but no genes for nitrogen fixation

Open access
Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria

Eiler, Alexander; Mondav, Rhiannon; Sinclair, Lucas; Fernandez-Vidal, Leyden et al.

Part of The ISME Journal, p. 1902-1914, 2016.

DOI for Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria

Open access
Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut

Ellegaard, Kirsten M.; Tamarit, Daniel; Javelind, Emelie; Olofsson, Tobias C. et al.

Part of BMC Genomics, 2015.

DOI for Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut Download full text (pdf) of Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut

Open access
Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees

Tamarit, Daniel; Ellegaard, Kirsten M.; Wikander, Johan; Olofsson, Tobias et al.

Part of Genome Biology and Evolution, p. 1455-1473, 2015.

DOI for Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees Download full text (pdf) of Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees

Open access
Mitochondrial genomes are retained by selective constraints on protein targeting

Björkholm, Patrik; Harish, Ajith; Hagström, Erik; Ernst, Andreas M. et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 10154-10161, 2015.

DOI for Mitochondrial genomes are retained by selective constraints on protein targeting
Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution

Martijn, Joran; Schulz, Frederik; Zaremba-Niedzwiedzka, Katarzyna; Viklund, Johan et al.

Part of The ISME Journal, p. 2373-2385, 2015.

DOI for Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution
Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae

Klasson, Lisa; Kumar, Nikhil; Bromley, Robin; Sieber, Karsten et al.

Part of BMC Genomics, p. 1097-, 2014.

DOI for Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae Download full text (pdf) of Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae

Open access
Missing Genes, Multiple ORFs, and C-to-U Type RNA Editing in Acrasis kona (Heterolobosea, Excavata) Mitochondrial DNA

Fu, Cheng-Jie; Sheikh, Sanea; Miao, Wei; Andersson, Siv G. E. et al.

Part of Genome Biology and Evolution, p. 2240-2257, 2014.

DOI for Missing Genes, Multiple ORFs, and C-to-U Type RNA Editing in Acrasis kona (Heterolobosea, Excavata) Mitochondrial DNA Download full text (pdf) of Missing Genes, Multiple ORFs, and C-to-U Type RNA Editing in Acrasis kona (Heterolobosea, Excavata) Mitochondrial DNA

Open access
Productivity and salinity structuring of the microplankton revealed by comparative freshwater metagenomics

Eiler, Alexander; Zaremba-Niedzwiedzka, Katarzyna; Martinez Garcia, Manuel; McMahon, Katherine et al.

Part of Environmental Microbiology, p. 2682-2698, 2014.

DOI for Productivity and salinity structuring of the microplankton revealed by comparative freshwater metagenomics Download full text (pdf) of Productivity and salinity structuring of the microplankton revealed by comparative freshwater metagenomics

Open access
Single cell genomics of deep ocean bacteria

Zhao, Weizhou; Andersson, Siv G. E.

Part of Trends in Microbiology, p. 233-234, 2014.

DOI for Single cell genomics of deep ocean bacteria
A Gene Transfer Agent and a Dynamic Repertoire of Secretion Systems Hold the Keys to the Explosive Radiation of the Emerging Pathogen Bartonella

Guy, Lionel; Nystedt, Björn; Toft, Christina; Zaremba-Niedzwiedzka, Katarzyna et al.

Part of PLOS Genetics, p. e1003393-, 2013.

DOI for A Gene Transfer Agent and a Dynamic Repertoire of Secretion Systems Hold the Keys to the Explosive Radiation of the Emerging Pathogen Bartonella Download full text (pdf) of A Gene Transfer Agent and a Dynamic Repertoire of Secretion Systems Hold the Keys to the Explosive Radiation of the Emerging Pathogen Bartonella

Open access
Adaptive Mutations and Replacements of Virulence Traits in the Escherichia coli O104:H4 Outbreak Population

Guy, Lionel; Jernberg, Cecilia; Norling, Jenny Arven; Ivarsson, Sofie et al.

Part of PLOS ONE, p. e63027-, 2013.

DOI for Adaptive Mutations and Replacements of Virulence Traits in the Escherichia coli O104:H4 Outbreak Population Download full text (pdf) of Adaptive Mutations and Replacements of Virulence Traits in the Escherichia coli O104:H4 Outbreak Population

Open access
Comparative and Phylogenomic Evidence that the Alphaproteobacterium HIMB59 is not a Member of the Oceanic SAR11 Clade

Viklund, Johan; Martijn, Joran; Ettema, Thijs; Andersson, Siv

Part of PLOS ONE, p. e78858-, 2013.

DOI for Comparative and Phylogenomic Evidence that the Alphaproteobacterium HIMB59 is not a Member of the Oceanic SAR11 Clade Download full text (pdf) of Comparative and Phylogenomic Evidence that the Alphaproteobacterium HIMB59 is not a Member of the Oceanic SAR11 Clade

Open access
Comparative Genomics of Wolbachia and the Bacterial Species Concept

Ellegaard, Kirsten Maren; Klasson, Lisa; Näslund, Kristina; Bourtzis, Kostas et al.

Part of PLOS Genetics, p. e1003381-, 2013.

DOI for Comparative Genomics of Wolbachia and the Bacterial Species Concept Download full text (pdf) of Comparative Genomics of Wolbachia and the Bacterial Species Concept

Open access
No Ancient DNA Damage in Actinobacteria from the Neanderthal Bone

Zaremba-Niedzwiedzka, Katarzyna; Andersson, Siv G. E.

Part of PLOS ONE, p. e62799-, 2013.

DOI for No Ancient DNA Damage in Actinobacteria from the Neanderthal Bone Download full text (pdf) of No Ancient DNA Damage in Actinobacteria from the Neanderthal Bone

Open access
Single cell genomics reveals low recombination frequencies in freshwater bacteria of the SAR11 clade

Zaremba-Niedzwiedzka, Katarzyna; Viklund, Johan; Zhao, Weizhou; Ast, Jennifer et al.

Part of Genome Biology, 2013.

DOI for Single cell genomics reveals low recombination frequencies in freshwater bacteria of the SAR11 clade Download full text (pdf) of Single cell genomics reveals low recombination frequencies in freshwater bacteria of the SAR11 clade

Open access
Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations

Ellegaard, Kirsten Maren; Klasson, Lisa; Andersson, Siv G. E.

Part of PLOS ONE, p. e82319-, 2013.

DOI for Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations Download full text (pdf) of Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations

Open access
The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes

Siozios, Stefanos; Ioannidis, Panagiotis; Klasson, Lisa; Andersson, Siv G. E. et al.

Part of PLOS ONE, p. e55390-, 2013.

DOI for The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes Download full text (pdf) of The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes

Open access
A genome-wide study of recombination rate variation in Bartonella henselae

Guy, Lionel; Nystedt, Björn; Sun, Yu; Näslund, Kristina et al.

Part of BMC Evolutionary Biology, p. 65-, 2012.

DOI for A genome-wide study of recombination rate variation in Bartonella henselae Download full text (pdf) of A genome-wide study of recombination rate variation in Bartonella henselae

Open access
Bacterial genomes: Next generation sequencing technologies for studies of bacterial ecosystems

Andersson, Siv G. E.; Goodman, A. L.

Part of Current Opinion in Microbiology, p. 603-604, 2012.

DOI for Bacterial genomes: Next generation sequencing technologies for studies of bacterial ecosystems
Genomic diversity of the 2011 European outbreaks of Escherichia coli O104:H4

Guy, Lionel; Jernberg, Cecilia; Ivarsson, Sofie; Hedenstrom, Ingela et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. E3627-E3628, 2012.

DOI for Genomic diversity of the 2011 European outbreaks of Escherichia coli O104:H4
Large-Scale Introgression Shapes the Evolution of the Mating-Type Chromosomes of the Filamentous Ascomycete Neurospora tetrasperma

Sun, Yu; Corcoran, Padraic; Menkis, Audrius; Whittle, Carrie A. et al.

Part of PLOS Genetics, p. e1002820-, 2012.

DOI for Large-Scale Introgression Shapes the Evolution of the Mating-Type Chromosomes of the Filamentous Ascomycete Neurospora tetrasperma Download full text (pdf) of Large-Scale Introgression Shapes the Evolution of the Mating-Type Chromosomes of the Filamentous Ascomycete Neurospora tetrasperma

Open access
A Phylometagenomic Exploration of Oceanic Alphaproteobacteria Reveals Mitochondrial Relatives Unrelated to the SAR11 Clade

Brindefalk, Björn; Ettema, Thijs J. G.; Viklund, Johan; Thollesson, Mikael et al.

Part of PLOS ONE, p. e24457-, 2011.

DOI for A Phylometagenomic Exploration of Oceanic Alphaproteobacteria Reveals Mitochondrial Relatives Unrelated to the SAR11 Clade
Independent Genome Reduction and Phylogenetic Reclassification of the Oceanic SAR11 Clade

Viklund, Johan; Ettema, Thijs; Andersson, Siv G. E.

Part of Molecular biology and evolution, p. 599-615, 2011.

DOI for Independent Genome Reduction and Phylogenetic Reclassification of the Oceanic SAR11 Clade
Genome dynamics of Bartonella grahamii in micro-populations of woodland rodents

Berglund, Eva C.; Ehrenborg, Christian; Vinnere Pettersson, Olga; Granberg, Fredrik et al.

Part of BMC Genomics, p. 152-, 2010.

DOI for Genome dynamics of Bartonella grahamii in micro-populations of woodland rodents
genoPlotR: comparative gene and genome visualization in R

Guy, Lionel; Roat Kultima, Jens; Andersson, Siv G.E.

Part of Bioinformatics, p. 2334-2335, 2010.

DOI for genoPlotR: comparative gene and genome visualization in R Download full text (pdf) of genoPlotR: comparative gene and genome visualization in R

Open access
Rapid diversification by recombination in Bartonella grahamii from wild rodents in Asia contrasts with low levels of genomic divergence in Northern Europe and America

Berglund, Eva C.; Ellegaard, Kirsten; Granberg, Fredrik; Xie, Zhoupeng et al.

Part of Molecular Ecology, p. 2241-2255, 2010.

DOI for Rapid diversification by recombination in Bartonella grahamii from wild rodents in Asia contrasts with low levels of genomic divergence in Northern Europe and America
The BatR/BatS Two-Component Regulatory System Controls the Adaptive Response of Bartonella henselae during Human Endothelial Cell Infection

Quebatte, Maxime; Dehio, Michaela; Tropel, David; Basler, Andrea et al.

Part of Journal of Bacteriology, p. 3352-3367, 2010.

DOI for The BatR/BatS Two-Component Regulatory System Controls the Adaptive Response of Bartonella henselae during Human Endothelial Cell Infection
Computational Resources in Infectious Disease: Limitations and Challenges

Berglund, Eva C.; Nystedt, Björn; Andersson, Siv G. E.

Part of PloS Computational Biology, p. e1000481-, 2009.

DOI for Computational Resources in Infectious Disease: Limitations and Challenges
Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii

Berglund, Eva C.; Frank, A. Carolin; Calteau, Alexandra; Vinnere Pettersson, Olga et al.

Part of PLoS genetics, p. e1000546-, 2009.

DOI for Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii
The alpha-proteobacteria: the Darwin finches of the bacterial world

Ettema, Thijs J. G.; Andersson, Siv G. E.

Part of Biology Letters, p. 429-432, 2009.

DOI for The alpha-proteobacteria: the Darwin finches of the bacterial world
The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans

Klasson, Lisa; Westberg, Joakim; Sapountzis, Panagiotis; Näslund, Kristina et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 5725-5730, 2009.

DOI for The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans
Comment on "A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea"

Ettema, Thijs; Andersson, Siv

Part of Science, p. 342-, 2008.

DOI for Comment on "A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea"
Diversifying Selection and Concerted Evolution of a Type IV Secretion System in Bartonella

Nystedt, Björn; Frank, Carolin; Thollesson, Mikael; Andersson, Siv

Part of Molecular biology and evolution, p. 287-300, 2008.

DOI for Diversifying Selection and Concerted Evolution of a Type IV Secretion System in Bartonella

Last modified: 2022-04-27