Ribosome Computations

List of Publications

Aqvist, J., Lind, C., Sund, J., Wallin, G. (2012). Bridging the gap between ribosome structure and biochemistry by mechanistic computations. Current opinion in structural biology, 22(6): 815-823

Wallin G and Åqvist J; The transition state for peptide bond formation reveals the ribosome as a water trap Proc Natl Acad Sci U S A107, 1888, (2010)

Sund, J., Andér, M., and Åqvist, J. Principles of stop-codon reading on the ribosome Nature465, 947, (2010)

Andér, M, Åqvist, J Does Glutamine Methylation Affect the Intrinsic Conformation of the Universally Conserved GGQ Motif in Ribosomal Release Factors? Biochemistry48, 3483, (2009)

Almlöf, M., Andér, M., Åqvist, J. Energetics of Codon-Anticodon Recognition on the Small Ribosomal Subunit. Biochemistry46, 200, (2007)

Trobro, S., Åqvist, J. A model for how ribosomal release factors induce peptidyl-tRNA cleavage in termination of protein synthesis Mol. Cell27, 758, (2007)

Trobro, S., Åqvist, J. Analysis of Predictions for the Catalytic Mechanism of Ribosomal Peptidyl transfer. Biochemistry45, 7049, (2006)

Trobro, S., Åqvist, J. Mechanism of Peptide Bond Synthesis on the Ribosome. Proc. Natl. Acad. Sci. U.S.A.102, 12395, (2005)