Publications

  • Lindén, Martin

    An early peak in ion channel research

    Part of Nature Physics, p. 105-105, 2018.

  • Travin, Dmitrii Y.; Metelev, Mikhail; Serebryakova, Marina; Komarova, Ekaterina S. et al.

    Biosynthesis of Translation Inhibitor Klebsazolicin Proceeds through Heterocyclization and N-Terminal Amidine Formation Catalyzed by a Single YcaO Enzyme

    Part of Journal of the American Chemical Society, p. 5625-5633, 2018.

  • Elias-Wolff, Federico; Lindén, Martin; Lyubartsev, Alexander P.; Brandt, Erik G. et al.

    Computing Curvature Sensitivity of Biomolecules in Membranes by Simulated Buckling

    Part of Journal of Chemical Theory and Computation, p. 1643-1655, 2018.

  • Ghosh, Anirban; Baltekin, Özden; Wäneskog, Marcus; Elkhalifa, Dina et al.

    Contact-dependent growth inhibition induces high levels of antibiotic-tolerant persister cells in clonal bacterial populations

    Part of EMBO Journal, 2018.

  • Liljeruhm, Josefine; Funk, Saskia K.; Tietscher, Sandra; Edlund, Anders D. et al.

    Engineering a palette of eukaryotic chromoproteins for bacterial synthetic biology

    Part of Journal of Biological Engineering, 2018.

    Open access
  • Wistrand-Yuen, Erik; Knopp, Michael; Hjort, Karin; Koskiniemi, Sanna et al.

    Evolution of high-level resistance during low-level antibiotic exposure

    Part of Nature Communications, 2018.

    Open access
  • Baltekin, Özden

    KN Direct phenotypic antimicrobial susceptibility testing under 30 minutes: Dynamics of single cell response revealed in automated microscopy with microfluidics

    Part of Journal of Veterinary Pharmacology and Therapeutics, p. 17-17, 2018.

  • Ballet, Caroline; Correia, Mario S. P.; Conway, Louis P.; Locher, Theresa L. et al.

    New enzymatic and mass spectrometric methodology for the selective investigation of gut microbiota-derived metabolites

    Part of Chemical Science, p. 6233-6239, 2018.

    Open access
  • Kipper, Kalle; Eremina, Nadja; Marklund, Emil; Tubasum, Sumera et al.

    Structure-guided approach to site-specific fluorophore labeling of the lac repressor LacI

    Part of PLoS ONE, 2018.

    Open access
  • Belliveau, Nathan M.; Barnes, Stephanie L.; Ireland, William T.; Jones, Daniel L. et al.

    Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria

    Part of Proceedings of the National Academy of Sciences of the United States of America, p. E4796-E4805, 2018.

  • Volkov, Ivan; Lindén, Martin; Aguirre, Javier; Ieong, Ka-Weng et al.

    tRNA tracking for direct measurements of protein synthesis kinetics in live cells

    Part of Nature Chemical Biology, p. 618-626, 2018.

  • Lindén, Martin; Elf, Johan

    Variational Algorithms for Analyzing Noisy Multistate Diffusion Trajectories

    Part of Biophysical Journal, p. 276-282, 2018.

  • Baltekin, Özden; Boucharin, Alexis; Tano, Eva; Andersson, Dan I et al.

    Antibiotic susceptibility testing in less than 30 min using direct single-cell imaging

    Part of Proceedings of the National Academy of Sciences of the United States of America, p. 9170-9175, 2017.

  • Kipper, Kalle; Lundius, Ebba G.; Ćurić, Vladimir; Nikic, Ivana et al.

    Application of Noncanonical Amino Acids for Protein Labeling in a Genomically Recoded Escherichia coli

    Part of ACS Photonics, p. 233-255, 2017.

  • Saupe, Falk; Reichel, Matthias; Huijbers, Elisabeth J. M.; Femel, Julia et al.

    Development of a novel therapeutic vaccine carrier that sustains high antibody titers against several targets simultaneously

    Part of The FASEB Journal, p. 1204-1214, 2017.

  • Doudna, Jennifer; Bar-Ziv, Roy; Elf, Johan; Noireaux, Vincent et al.

    How Will Kinetics and Thermodynamics Inform Our Future Efforts to Understand and Build Biological Systems?

    Part of CELL SYSTEMS, p. 144-146, 2017.

  • Lawson, Michael J.; Camsund, Daniel; Larsson, Jimmy; Baltekin, Özden et al.

    In situ genotyping of a pooled strain library after characterizing complex phenotypes

    Part of Molecular Systems Biology, 2017.

    Open access
  • Jones, Daniel; Unoson, Cecilia; Leroy, Prune; Curic, Vladimir et al.

    Kinetics of dCas9 Target Search in Escherichia Coli

    Part of Biophysical Journal, p. 314A-314A, 2017.

  • Jones, Daniel; Leroy, Prune; Unoson, Cecilia; Fange, David et al.

    Kinetics of dCas9 target search in Escherichia coli

    Part of Science, p. 1420-1423, 2017.

  • Marklund, Emil; Amselem, Elias; Kipper, Kalle; Johansson, Magnus et al.

    Measuring the Orientation of Single Proteins Interacting with DNA using Fluorescence Polarization Microscopy

    Part of Biophysical Journal, p. 169A-169A, 2017.

  • Lehmann, Laura C.; Hewitt, Graeme; Aibara, Shintaro; Leitner, Alexander et al.

    Mechanistic Insights into Autoinhibition of the Oncogenic Chromatin Remodeler ALC1

    Part of Molecular Cell, p. 847-859.e7, 2017.

    Open access
  • Balzarotti, Francisco; Eilers, Yvan; Gwosch, Klaus C.; Gynnå, Arvid H. et al.

    Nanometer resolution imaging and tracking of fluorescent molecules with minimal photon fluxes

    Part of Science, p. 606-612, 2017.

  • Lindén, Martin; Curic, Vladimir; Amselem, Elias; Elf, Johan et al.

    Pointwise error estimates in localization microscopy

    Part of Nature Communications, 2017.

    Open access
  • Amselem, Elias; Marklund, Emil; Kipper, Kalle; Johansson, Magnus et al.

    Real- Time Single Protein Tracking with Polarization Readout using a Confocal Microscope

    Part of Biophysical Journal, p. 295A-295A, 2017.

  • Pandzic, Tatjana; Rendo, Verónica; Lim, Jinyeong; Larsson, Chatarina et al.

    Somatic PRDM2 c.4467delA mutations in colorectal cancers control histone methylation and tumor growth

    Part of OncoTarget, p. 98646-98659, 2017.

    Open access
  • Lind, Peter A.; Arvidsson, Lars; Berg, Otto; Andersson, Dan I. et al.

    Variation in Mutational Robustness between Different Proteins and the Predictability of Fitness Effects

    Part of Molecular biology and evolution, p. 408-418, 2017.

  • Martyna, Agnieszka; Gomez-Llobregat, Jordi; Lindén, Martin; Rossman, Jeremy S. et al.

    Curvature Sensing by a Viral Scission Protein

    Part of Biochemistry, p. 3493-3496, 2016.

  • Elf, Johan

    Hypothesis: Homologous Recombination Depends on Parallel Search

    Part of CELL SYSTEMS, p. 325-327, 2016.

  • Volkov, Ivan; Aguirre, Javier; Lindén, Martin; Elf, Johan et al.

    In Vivo Measurements of Protein Synthesis Kinetics using Single-Molecule Tracking of E.Coli tRNAS

    Part of Biophysical Journal, p. 351A-351A, 2016.

  • Belikov, Sergey; Berg, Otto G.; Wrange, Orjan

    Quantification of transcription factor-DNA binding affinity in a living cell

    Part of Nucleic Acids Research, p. 3045-3058, 2016.

    Open access
  • Lindén, Martin; Ćurić, Vladimir; Boucharin, Alexis; Fange, David et al.

    Simulated single molecule microscopy with SMeagol

    Part of Bioinformatics, p. 2394-2395, 2016.

    Open access
  • Levendosky, Robert F.; Sabantsev, Anton; Deindl, Sebastian; Bowman, Gregory D. et al.

    The Chd1 chromatin remodeler shifts hexasomes unidirectionally

    Part of eLIFE, 2016.

    Open access
  • Berg, Otto G.; Mahmutovic, Anel; Marklund, Emil; Elf, Johan et al.

    The helical structure of DNA facilitates binding

    Part of Journal of Physics A, 2016.

  • Walldén, Mats; Fange, David; Lundius, Ebba Gregorsson; Baltekin, Özden et al.

    The Synchronization of Replication and Division Cycles in Individual E. coli Cells

    Part of Cell, p. 729-739, 2016.