Department of Cell and Molecular Biology

Publications

  • Ankarklev, Johan; Lebbad, Marianne; Einarsson, Elin; Franzen, Oscar et al.

    A novel high-resolution multilocus sequence typing of Giardia intestinalis Assemblage A isolates reveals zoonotic transmission, clonal outbreaks and recombination

    Part of Infection, Genetics and Evolution, p. 7-16, 2018.

  • Ghosh, Anirban; Baltekin, Özden; Wäneskog, Marcus; Elkhalifa, Dina et al.

    Contact-dependent growth inhibition induces high levels of antibiotic-tolerant persister cells in clonal bacterial populations

    Part of EMBO Journal, 2018.

  • Emery, Samantha J.; Baker, Louise; Ansell, Brendan R. E.; Mirzaei, Mehdi et al.

    Differential protein expression and post-translational modifications in metronidazole-resistant Giardia duodenalis

    Part of GigaScience, 2018.

  • Liljeruhm, Josefine; Funk, Saskia K.; Tietscher, Sandra; Edlund, Anders D. et al.

    Engineering a palette of eukaryotic chromoproteins for bacterial synthetic biology

    Part of Journal of Biological Engineering, 2018.

  • Wistrand-Yuen, Erik; Knopp, Michael; Hjort, Karin; Koskiniemi, Sanna et al.

    Evolution of high-level resistance during low-level antibiotic exposure

    Part of Nature Communications, 2018.

  • Thorpe, Michael; Fu, Zhirong; Chahal, Gurdeep; Akula, Srinivas et al.

    Extended cleavage specificity of human neutrophil cathepsin G: A low activity protease with dual chymase and tryptase-type specificities

    Part of PLoS ONE, 2018.

  • Liao, Zhen; Kjellin, Jonas; Höppner, Marc P.; Grabherr, Manfred et al.

    Global characterization of the Dicer-like protein DrnB roles in miRNA biogenesis in the social amoeba Dictyostelium discoideum

    Part of RNA Biology, 2018.

  • Nilsson, Louise K. J.; Sharma, Anil; Bhatnagar, Raj K.; Bertilsson, Stefan et al.

    Presence of Aedes and Anopheles mosquito larvae is correlated to bacteria found in domestic water-storage containers

    Part of FEMS Microbiology Ecology, 2018.

  • Hammarlöf, Disa L.; Kroger, Carsten; Owen, Sian V.; Canals, Rocio et al.

    Role of a single noncoding nucleotide in the evolution of an epidemic African clade of Salmonella

    Part of Proceedings of the National Academy of Sciences of the United States of America, p. E2614-E2623, 2018.

  • Liu, Jingyi; Ma'ayeh, Showgy Y.; Peirasmaki, Dimitra; Lundstrom-Stadelmann, Britta et al.

    Secreted Giardia intestinalis cysteine proteases disrupt intestinal epithelial cell junctional complexes and degrade chemokines

    Part of Virulence, p. 879-894, 2018.

  • Sterk, Maaike; Romilly, Cedric; Wagner, Gerhart E. H.

    Unstructured 5'-tails act through ribosome standby to override inhibitory structure at ribosome binding sites.

    Part of Nucleic Acids Research, p. 4188-4199, 2018.

  • Sternes, Peter R.; Lee, Danna; Kutyna, Dariusz R.; Borneman, Anthony R. et al.

    A combined meta-barcoding and shotgun metagenomic analysis of spontaneous wine fermentation

    Part of GigaScience, p. 1-30, 2017.

  • Ruhe, Zachary C.; Nguyen, Josephine Y.; Xiong, Jing; Koskiniemi, Sanna et al.

    CdiA Effectors Use Modular Receptor-Binding Domains To Recognize Target Bacteria

    Part of mBio, 2017.

  • de Miranda, Joachim R.; Hedman, Harald; Onorati, Piero; Stephan, Jorg et al.

    Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden

    Part of Viruses, 2017.

  • Ma'ayeh, Showgy Y.; Liu, Jingyi; Peirasmaki, Dimitra; Hörnaeus, Katarina et al.

    Characterization of the Giardia intestinalis secretome during interaction with human intestinal epithelial cells: The impact on host cells

    Part of PLoS Neglected Tropical Diseases, 2017.

  • Owen, Sian V.; Wenner, Nicolas; Canals, Rocio; Makumi, Angela et al.

    Characterization of the Prophage Repertoire of African Salmonella Typhimurium ST313 Reveals High Levels of Spontaneous Induction of Novel Phage BTP1

    Part of Frontiers in Microbiology, 2017.

  • Bjelkmar, Par; Hansen, Anette; Schonning, Caroline; Bergstrom, Jakob et al.

    Early outbreak detection by linking health advice line calls to water distribution areas retrospectively demonstrated in a large waterborne outbreak of cryptosporidiosis in Sweden

    Part of BMC Public Health, 2017.

  • Zamponi, Nahuel; Zamponi, Emiliano; Mayol, Gonzalo F.; Lanfredi-Rangel, Adriana et al.

    Endoplasmic reticulum is the sorting core facility in the Golgi-lacking protozoan Giardia lamblia

    Part of Traffic, p. 604-621, 2017.

  • Amlinger, Lina; Hoekzema, Mirthe; Wagner, Gerhart E. H.; Koskiniemi, Sanna et al.

    Fluorescent CRISPR Adaptation Reporter for rapid quantification of spacer acquisition

    Part of Scientific Reports, 2017.

  • Amlinger, Lina; Hoekzema, Mirthe; Wagner, Gerhart E. H.; Koskiniemi, Sanna et al.

    Fluorescent CRISPR Adaptation Reporter for rapid quantification of spacer acquisition

    Part of Scientific Reports, 2017.

  • Voleman, Lubos; Najdrova, Vladimira; Ástvaldsson, Ásgeir; Tumova, Pavla et al.

    Giardia intestinalis mitosomes undergo synchronized fission but not fusion and are constitutively associated with the endoplasmic reticulum

    Part of BMC Biology, 2017.

  • Bourges, Anais C.; Montaguth, Oscar E. Torres; Ghosh, Anirban; Tadesse, Wubishet M. et al.

    High pressure activation of the Mrr restriction endonuclease in Escherichia coli involves tetramer dissociation

    Part of Nucleic Acids Research, p. 5323-5332, 2017.

  • Moor, Kathrin; Diard, Mederic; Sellin, Mikael E.; Felmy, Boas et al.

    High-avidity IgA protects the intestine by enchaining growing bacteria

    Part of Nature, p. 498-+, 2017.

  • Dierker, Tabea; Noborn, F.; Hinas, Andrea; Kjellén, Lena et al.

    Identification of novel chondroitin sulfate sulfotransferases and proteoglycan core proteins in the nematode C. elegans

    Part of International journal of experimental pathology (Print), p. A4-A4, 2017.

  • Nosrati, Masoumeh; Solbak, Sara; Nordesjö, Olle; Nissbeck, Mikael et al.

    Insights from engineering the Affibody-Fc interaction with a computational-experimental method

    Part of Protein Engineering Design & Selection, p. 593-601, 2017.

  • Jones, Daniel; Leroy, Prune; Unoson, Cecilia; Fange, David et al.

    Kinetics of dCas9 target search in Escherichia coli

    Part of Science, p. 1420-1423, 2017.

  • Bergström, Joakim J. E.; Heyman, Birgitta

    Mice Immunized With IgG Anti-Sheep Red Blood Cells (SRBC) Together With SRBC Have a Suppressed Anti-SRBC Antibody Response but Generate Germinal Centers and Anti-IgG Antibodies in Response to the Passively Administered IgG

    Part of Frontiers in Immunology, 2017.

  • Berghoff, Bork A.; Karlsson, Torgny; Kallman, Thomas; Wagner, Gerhart E. H. et al.

    RNA-sequence data normalization through in silico prediction of reference genes: the bacterial response to DNA damage as case study

    Part of BioData Mining, 2017.

  • Gonzalez, Grecia M.; Hardwick, Steven W.; Maslen, Sarah L.; Skehel, J. Mark et al.

    Structure of the Escherichia coli ProQ RNA-binding protein

    Part of RNA, p. 696-711, 2017.

  • Adler, Sara; Widerstrom, Micael; Lindh, Johan; Lilja, Mikael et al.

    Symptoms and risk factors of Cryptosporidium hominis infection in children: data from a large waterborne outbreak in Sweden

    Part of Parasitology Research, p. 2613-2618, 2017.

  • Li, Zhiqiang; Peirasmaki, Dimitra; Svärd, Staffan; Abrink, Magnus et al.

    The chymase mouse mast cell protease 4 has a protective role in the early stage of giardia infections

    Part of Scandinavian Journal of Immunology, p. 287-287, 2017.

  • Zhao, Yani; Holmgren, Benjamin T.; Hinas, Andrea

    The conserved SNARE SEC-22 localizes to late endosomes and negatively regulates RNA interference in Caenorhabditis elegans

    Part of RNA, p. 297-307, 2017.

  • Ansell, Brendan R. E.; Baker, Louise; Emery, Samantha J.; McConville, Malcolm J. et al.

    Transcriptomics Indicates Active and Passive Metronidazole Resistance Mechanisms in Three Seminal Giardia Lines

    Part of Frontiers in Microbiology, 2017.

  • Berghoff, Bork A.; Hoekzema, Mirthe; Aulbach, Lena; Wagner, Gerhart E. H. et al.

    Two regulatory RNA elements affect TisB-dependent depolarization and persister formation

    Part of Molecular Microbiology, p. 1020-1033, 2017.

  • Mueller, Anna A.; Dolowschiak, Tamas; Sellin, Mikael E.; Felmy, Boas et al.

    An NK Cell Perforin Response Elicited via IL-18 Controls Mucosal Inflammation Kinetics during Salmonella Gut Infection

    Part of PLoS Pathogens, 2016.

  • Buck, Moritz; Nilsson, Louise K. J.; Brunius, Carl; Dabire, Roch K. et al.

    Bacterial associations reveal spatial population dynamics in Anopheles gambiae mosquitoes

    Part of Scientific Reports, 2016.

  • Malik, Sohaib Zafar; Göransson, Ulf; Andersson, Dan I

    Bacterial Resistance To A Cyclic Antimicrobial Peptide

    Part of Journal of Peptide Science, p. S180-S180, 2016.

  • Einarsson, Elin; Ástvaldsson, Ásgeir; Hultenby, Kjell; Andersson, Jan O. et al.

    Comparative cell biology and evolution of Annexins in Diplomonads

    Part of MSphere, 2016.

  • Einarsson, Elin; Troell, Karin; Höppner, Marc; Grabherr, Mannfred et al.

    Coordinated Changes in Gene Expression Throughout Encystation of Giardia intestinalis

    Part of PLoS Neglected Tropical Diseases, 2016.

  • Ansell, Brendan R. E.; McConville, Malcolm J.; Baker, Louise; Korhonen, Pasi K. et al.

    Divergent Transcriptional Responses to Physiological and Xenobiotic Stress in Giardia duodenalis

    Part of Antimicrobial Agents and Chemotherapy, p. 6034-6045, 2016.

  • Saghaug, Christina Skar; Sornes, Steinar; Peirasmaki, Dimitra; Svärd, Staffan et al.

    Human Memory CD4+ T Cell Immune Responses against Giardia lamblia

    Part of Clinical and Vaccine Immunology, p. 11-18, 2016.

  • Verma, Vijay; Kumar, Ajay; Nitharwal, Ram Gopal; Alam, Jawed et al.

    Modulation of the enzymatic activities of replicative helicase (DnaB) by interaction with Hp0897: a possible mechanism for helicase loading in Helicobacter pylori

    Part of Nucleic Acids Research, p. 3288-3303, 2016.

  • Dierker, Tabea; Shao, Chun; Haitina, Tatjana; Zaia, Joseph et al.

    Nematodes join the family of chondroitin sulfate-synthesizing organisms: Identification of an active chondroitin sulfotransferase in Caenorhabditis elegans

    Part of Scientific Reports, 2016.

  • Di Martino, Maria Letizia; Romilly, Cedric; Wagner, Gerhart E. H.; Colonna, Bianca et al.

    One Gene and Two Proteins: a Leaderless mRNA Supports the Translation of a Shorter Form of the Shigella VirF Regulator

    Part of mBio, 2016.

  • Carranza, Pedro G.; Gargantini, Pablo R.; Prucca, Cesar G.; Torri, Alessandro et al.

    Specific histone modifications play critical roles in the control of encystation and antigenic variation in the early-branching eukaryote Giardia lamblia

    Part of International Journal of Biochemistry and Cell Biology, p. 32-43, 2016.

  • Das, Sarbashis; Pettersson, B. M. Fredrik; Behra, Phani Rama Krishna; Ramesh, Malavika et al.

    The Mycobacterium phlei Genome: Expectations and Surprises

    Part of Genome Biology and Evolution, p. 975-985, 2016.

  • Schmith, Anika; Spaller, Thomas; Gaube, Friedemann; Fransson, Asa et al.

    A host factor supports retrotransposition of the TRE5-A population in Dictyostelium cells by suppressing an Argonaute protein

    Part of Mobile DNA, 2015.

  • Van Lith, Lindy; Soba, Barbara; Vizcaino, Vivian Villalba; Svärd, Staffan et al.

    A real-time assemblage-specific PCR assay for the detection of Giardia duodenalis assemblages A, B and E in fecal samples

    Part of Veterinary parasitology, p. 28-34, 2015.

  • Das, Sarbashis; Pettersson, B M Fredrik; Behra, Phani Rama Krishna; Ramesh, Malavika et al.

    Characterization of three Mycobacterium spp. with potential use in bioremediation by genome sequencing and comparative genomics

    Part of Genome Biology and Evolution, p. 1871-1886, 2015.

  • Ankarklev, Johan; Franzen, Oscar; Peirasmaki, Dimitra; Jerlstrom-Hultqvist, Jon et al.

    Comparative genomic analyses of freshly isolated Giardia intestinalis assemblage A isolates

    Part of BMC Genomics, 2015.